Coding

Part:BBa_K4131008:Design

Designed by: Chun Ying Yu   Group: iGEM22_CCU_Taiwan   (2022-10-09)


pfa B gene (Shewanella pneumatophori), codon optimized for E.Coli expression


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 1305
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 297
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal SapI site found at 1515


Design Notes

The sequence is codon optimized for E.Coli expression, and the restriction enzyme sites of XbaI, SpeI, EcoRI, PstI, and NotI are eliminated.


Source

The sequence is extracted from the region 22177-24518 in Shewanella pneumatophori strain SCRC-2738 genome (U73935.1)

References